EnhancerDB
  1. Home
  2. SNP
  3. rs189554403[chr1:232730996]
Enhancers that have rs189554403[chr1:232730996]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs189554403[chr1:232730996]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232730990 232730997 NKX3-1 JASPAR yes 36175248
chr1 232730991 232730999 FOXC1 JASPAR yes 36175249
Genes associated with rs189554403[chr1:232730996], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More