EnhancerDB
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  3. rs189654580[chr1:172951187]
Enhancers that have rs189654580[chr1:172951187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs189654580[chr1:172951187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172950677 172952996 TEF1 GTRD no Bone (Osteoblast) 21350841
chr1 172951177 172951190 POU2F2 JASPAR yes 33175271
Genes associated with rs189654580[chr1:172951187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More