EnhancerDB
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  3. rs189887620[chr12:122943101]
Enhancers that have rs189887620[chr12:122943101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs189887620[chr12:122943101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122942166 122943341 TCF7L2 GTRD no Colon (HCT116) 21579866
chr12 122942400 122943111 ZNF143 GTRD no Epithelial (MCF-7) 21579868
chr12 122942437 122943372 ZNF274 GTRD no Liver (HepG2) 21579869
chr12 122942444 122943124 ZNF274 GTRD no Liver (HepG2) 21579870
chr12 122942444 122943150 ZNF274 GTRD no Cervix (HeLa-S3) 21579871
chr12 122942488 122943176 ZNF143 GTRD no Epithelial (MCF-7) 21579876
chr12 122942532 122943652 ZNF274 GTRD no Cervix (HeLa-S3) 21579885
chr12 122942535 122943101 ZNF274 GTRD no Cervix (HeLa-S3) 21579886
chr12 122942558 122943170 ZNF274 GTRD no Liver (HepG2) 21579889
chr12 122942602 122943218 ZNF274 GTRD no Liver (HepG2) 21579894
chr12 122942613 122943138 ZNF274 GTRD no Liver (HepG2) 21579896
chr12 122942623 122943341 ZNF274 GTRD no Liver (HepG2) 21579901
chr12 122942628 122943137 ZNF274 GTRD no Cervix (HeLa-S3) 21579903
chr12 122942629 122943156 ZNF274 GTRD no Liver (HepG2) 21579904
chr12 122942665 122943202 ZNF274 GTRD no Liver (HepG2) 21579908
chr12 122942930 122943617 ZNF143 GTRD no Epithelial (MCF-7) 21579909
chr12 122943076 122943250 ZNF143 GTRD no Epithelial (MCF-7) 21579910
Genes associated with rs189887620[chr12:122943101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More