EnhancerDB
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  3. rs190001186[chr18:57580461]
Enhancers that have rs190001186[chr18:57580461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs190001186[chr18:57580461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57580033 57580464 ZNF274 GTRD no Blood (GM12878) 21824900
chr18 57580213 57581047 ZNF274 GTRD no Cervix (HeLa-S3) 21824901
chr18 57580325 57581067 TCF7L2 GTRD no Colon (HCT116) 21824902
chr18 57580385 57580945 ZNF274 GTRD no Bone Marrow (K562) 21824903
chr18 57580398 57580724 ZNF274 GTRD no Bone Marrow (K562) 21824904
chr18 57580436 57580728 ZNF274 GTRD no Cervix (HeLa-S3) 21824905
chr18 57580454 57580466 PKNOX1 JASPAR yes 111063809
chr18 57580454 57580466 PKNOX2 JASPAR yes 111063810
chr18 57580454 57580466 TGIF1 JASPAR yes 111063811
chr18 57580454 57580466 TGIF2 JASPAR yes 111063812
chr18 57580454 57580473 RFX2 JASPAR yes 111063813
chr18 57580456 57580471 RFX5 JASPAR yes 111063814
chr18 57580457 57580462 MYC TRANSFAC yes 111063815
chr18 57580460 57580474 TLX1 JASPAR yes 111063816
chr18 57580461 57580475 TLX1 JASPAR yes 111063817
Genes associated with rs190001186[chr18:57580461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More