EnhancerDB
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  3. rs190003819[chr15:40180054]
Enhancers that have rs190003819[chr15:40180054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40165269 40184115 enh31319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Astrocyte Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190003819[chr15:40180054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649067
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133328
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133329
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649083
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133347
chr15 40179848 40180338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133348
chr15 40179851 40180207 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649084
chr15 40179851 40180207 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133349
chr15 40179851 40180207 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133350
chr15 40179923 40180370 CTCF UCSC Txn Factor no Conserved 108133351
chr15 40179973 40180333 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133352
chr15 40180003 40180273 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649085
chr15 40180003 40180273 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133353
chr15 40180023 40180301 RAD21 UCSC Txn Factor no Conserved 108133354
chr15 40180027 40180363 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649086
chr15 40180027 40180363 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133355
chr15 40180032 40180276 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649087
chr15 40180032 40180276 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133356
chr15 40180034 40180250 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108133357
chr15 40180034 40180304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133358
chr15 40180037 40180287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649088
chr15 40180037 40180287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108133359
chr15 40180038 40180282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108133360
chr15 40180038 40180298 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649089
chr15 40180038 40180298 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108133361
chr15 40180039 40180329 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108133362
chr15 40180045 40180275 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21649090
chr15 40180045 40180275 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108133363
chr15 40180051 40180059 OTX2 JASPAR yes 22917749
Genes associated with rs190003819[chr15:40180054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More