EnhancerDB
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  3. rs190055480[chr17:78578658]
Enhancers that have rs190055480[chr17:78578658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78568992 78597075 enh4631
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs190055480[chr17:78578658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78578648 78578658 SP1 JASPAR yes 56257397
chr17 78578648 78578658 ZNF740 JASPAR yes 56257398
chr17 78578657 78578669 HES5 JASPAR yes 56257399
chr17 78578658 78578668 CLOCK JASPAR yes 56257400
chr17 78578658 78578668 HEY1 JASPAR yes 56257401
chr17 78578658 78578668 HEY2 JASPAR yes 56257402
chr17 78578658 78578668 MNT JASPAR yes 56257403
Genes associated with rs190055480[chr17:78578658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More