EnhancerDB
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  3. rs190354618[chr10:28668761]
Enhancers that have rs190354618[chr10:28668761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs190354618[chr10:28668761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28667878 28669718 ZNF143 GTRD no Epithelial (MCF-7) 21423026
chr10 28668337 28669801 ZNF143 GTRD no Epithelial (MCF-7) 21423027
chr10 28668398 28669177 TCF7L2 GTRD no Colon (HCT116) 21423028
chr10 28668419 28669314 ZNF143 GTRD no Epithelial (MCF-7) 21423029
chr10 28668422 28669842 ZNF143 GTRD no Epithelial (MCF-7) 21423030
chr10 28668546 28669066 TCF7L2 GTRD no Colon (HCT116) 21423031
chr10 28668638 28669250 ZNF143 GTRD no Epithelial (MCF-7) 21423032
chr10 28668658 28669102 TCF7L2 GTRD no Colon (HCT116) 21423033
chr10 28668696 28669199 TCF7L2 GTRD no Colon (HCT116) 21423034
chr10 28668728 28669089 TCF7L2 GTRD no Colon (HCT116) 21423035
Genes associated with rs190354618[chr10:28668761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More