EnhancerDB
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  3. rs190424268[chr1:53170078]
Enhancers that have rs190424268[chr1:53170078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53166639 53178215 enh11853
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Uterus Heart
Transcript factors that have rs190424268[chr1:53170078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53170059 53170080 IRF1 JASPAR yes 28903317
chr1 53170065 53170080 FOXP1 JASPAR yes 28903320
chr1 53170065 53170080 MEF2C JASPAR yes 28903321
chr1 53170065 53170086 IRF1 JASPAR yes 28903322
chr1 53170066 53170081 MEF2A JASPAR yes 28903323
chr1 53170067 53170079 FOXC2 JASPAR yes 28903324
chr1 53170067 53170079 MEF2A JASPAR yes 28903325
chr1 53170067 53170079 MEF2B JASPAR yes 28903326
chr1 53170067 53170079 MEF2D JASPAR yes 28903327
chr1 53170068 53170078 MEF2A JASPAR yes 28903328
chr1 53170069 53170084 FOXP1 JASPAR yes 28903329
chr1 53170071 53170086 MEF2C JASPAR yes 28903330
chr1 53170075 53170081 TBP TRANSFAC yes 28903331
Genes associated with rs190424268[chr1:53170078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More