EnhancerDB
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  3. rs190460874[chr1:28389164]
Enhancers that have rs190460874[chr1:28389164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs190460874[chr1:28389164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28388958 28389635 ZNF274 GTRD no Bone Marrow (K562) 21325306
chr1 28388958 28389635 ZNF274 GTRD no Bone Marrow (K562) 107802633
chr1 28389163 28389183 RREB1 JASPAR yes 27735432
Genes associated with rs190460874[chr1:28389164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 28099694 28150963 + STX12 ENSG00000117758.9 28099694 238201 Liver 0.293213 397