EnhancerDB
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  3. rs190540929[chr6:40988923]
Enhancers that have rs190540929[chr6:40988923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40987562 40993870 enh59617
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Cervix (HeLa-S3) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs190540929[chr6:40988923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40988917 40988935 RARA JASPAR yes 101629473
chr6 40988919 40988932 DUXA JASPAR yes 101629474
chr6 40988919 40988932 JUN JASPAR yes 101629475
chr6 40988919 40988933 RORA JASPAR yes 101629476
chr6 40988920 40988930 RORA JASPAR yes 101629477
chr6 40988920 40988931 PHOX2A JASPAR yes 101629478
chr6 40988922 40988932 POU6F2 JASPAR yes 101629479
chr6 40988923 40988933 ALX3 JASPAR yes 101629480
chr6 40988923 40988933 EMX1 JASPAR yes 101629481
chr6 40988923 40988933 EMX2 JASPAR yes 101629482
chr6 40988923 40988933 EN2 JASPAR yes 101629483
chr6 40988923 40988933 ESX1 JASPAR yes 101629484
chr6 40988923 40988933 EVX1 JASPAR yes 101629485
chr6 40988923 40988933 EVX2 JASPAR yes 101629486
chr6 40988923 40988933 GBX1 JASPAR yes 101629487
chr6 40988923 40988933 GBX2 JASPAR yes 101629488
chr6 40988923 40988933 GSX1 JASPAR yes 101629489
chr6 40988923 40988933 HOXA2 JASPAR yes 101629490
chr6 40988923 40988933 HOXB2 JASPAR yes 101629491
chr6 40988923 40988933 HOXB3 JASPAR yes 101629492
chr6 40988923 40988933 LHX2 JASPAR yes 101629493
chr6 40988923 40988933 LHX6 JASPAR yes 101629494
chr6 40988923 40988933 MEOX1 JASPAR yes 101629495
chr6 40988923 40988933 MEOX2 JASPAR yes 101629496
chr6 40988923 40988933 NOTO JASPAR yes 101629497
Genes associated with rs190540929[chr6:40988923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More