EnhancerDB
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  3. rs190556750[chr12:122940909]
Enhancers that have rs190556750[chr12:122940909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs190556750[chr12:122940909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122940415 122940985 TCF7L2 GTRD no Colon (HCT116) 21579848
chr12 122940633 122941302 TCF7L2 GTRD no Colon (HCT116) 21579849
chr12 122940642 122941582 TCF7L2 GTRD no Colon (HCT116) 21579850
chr12 122940645 122941319 ZNF143 GTRD no Epithelial (MCF-7) 21579851
chr12 122940646 122941379 ZNF143 GTRD no Epithelial (MCF-7) 21579852
chr12 122940652 122942484 ZNF274 GTRD no Cervix (HeLa-S3) 21579853
chr12 122940669 122941505 TCF7L2 GTRD no Colon (HCT116) 21579854
chr12 122940676 122941496 TCF7L2 GTRD no Colon (HCT116) 21579855
chr12 122940905 122940919 XBP1 JASPAR yes 124281304
chr12 122940906 122940920 BATF3 JASPAR yes 124281305
chr12 122940908 122940918 SREBF1 JASPAR yes 124281306
Genes associated with rs190556750[chr12:122940909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More