EnhancerDB
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  3. rs190560594[chr1:116848823]
Enhancers that have rs190560594[chr1:116848823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190560594[chr1:116848823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116848553 116849529 ZNF274 GTRD no Bone Marrow (K562) 21331925
chr1 116848564 116849376 ZNF274 GTRD no Bone Marrow (K562) 21331926
chr1 116848565 116849283 ZNF274 GTRD no Bone Marrow (K562) 21331927
chr1 116848594 116849466 ZNF274 GTRD no Cervix (HeLa-S3) 21331928
chr1 116848666 116849548 ZNF143 GTRD no Epithelial (MCF-7) 21331929
chr1 116848706 116849264 ZNF274 GTRD no Bone Marrow (K562) 21331930
chr1 116848707 116849265 ZNF143 GTRD no Epithelial (MCF-7) 21331931
chr1 116848711 116849492 ZNF274 GTRD no Bone Marrow (K562) 21331932
chr1 116848752 116849154 ZNF274 GTRD no Bone Marrow (K562) 21331933
chr1 116848760 116849206 ZNF274 GTRD no Bone Marrow (K562) 21331934
chr1 116848777 116849057 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21331935
chr1 116848789 116849065 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21331936
chr1 116848804 116849044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21331937
chr1 116848816 116848826 MAX JASPAR yes 31792049
chr1 116848816 116848827 USF1 JASPAR yes 31792050
chr1 116848816 116848827 USF2 JASPAR yes 31792051
chr1 116848817 116848827 TFE3 JASPAR yes 31792052
chr1 116848817 116848827 TFEB JASPAR yes 31792053
chr1 116848817 116848827 TFEC JASPAR yes 31792054
chr1 116848817 116848828 USF2 JASPAR yes 31792055
chr1 116848818 116848825 USF1 JASPAR yes 31792056
chr1 116848819 116848824 MYC TRANSFAC yes 31792057
chr1 116848819 116848824 USF1 TRANSFAC yes 31792058
chr1 116848819 116848824 USF2 TRANSFAC yes 31792059
Genes associated with rs190560594[chr1:116848823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More