EnhancerDB
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  3. rs190708469[chr1:56049650]
Enhancers that have rs190708469[chr1:56049650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56036104 56052895 enh26722
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs190708469[chr1:56049650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56049643 56049656 TFAP2A JASPAR yes 29052079
chr1 56049643 56049656 TFAP2B JASPAR yes 29052080
chr1 56049643 56049656 TFAP2C JASPAR yes 29052081
Genes associated with rs190708469[chr1:56049650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More