EnhancerDB
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  3. rs191207173[chr1:42128570]
Enhancers that have rs191207173[chr1:42128570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42127851 42128791 vista1340
VISTA
Transcript factors that have rs191207173[chr1:42128570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42128558 42128571 SMAD2 JASPAR yes 28406841
chr1 42128558 42128571 SMAD2 JASPAR yes 118279229
chr1 42128561 42128574 TFAP2A JASPAR yes 28406842
chr1 42128561 42128574 TFAP2A JASPAR yes 118279230
Genes associated with rs191207173[chr1:42128570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More