EnhancerDB
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  3. rs1920420[chr1:31222491]
Enhancers that have rs1920420[chr1:31222491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31219099 31228985 enh190
Brain (SK-N-SH) Thymus Blood (OCI-LY7) Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell)
chr1 31222458 31222949 vista1039
VISTA
Transcript factors that have rs1920420[chr1:31222491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31218261 31224529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802694
chr1 31218261 31224529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802695
chr1 31218261 31224529 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802696
chr1 31222478 31222492 RORA JASPAR yes 27875590
chr1 31222478 31222492 RORA JASPAR yes 118264908
chr1 31222483 31222494 FOXA1 JASPAR yes 27875591
chr1 31222483 31222494 FOXA1 JASPAR yes 118264909
chr1 31222483 31222498 FOXA1 JASPAR yes 27875592
chr1 31222483 31222498 FOXA1 JASPAR yes 118264910
Genes associated with rs1920420[chr1:31222491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More