EnhancerDB
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  3. rs192540361[chr1:117048758]
Enhancers that have rs192540361[chr1:117048758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192540361[chr1:117048758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117048574 117049124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333307
chr1 117048724 117048988 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333308
chr1 117048740 117049136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333309
chr1 117048741 117049071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333310
chr1 117048748 117048758 SP1 JASPAR yes 31815195
chr1 117048754 117048765 NFKB1 JASPAR yes 31815196
chr1 117048755 117048760 ETS2 TRANSFAC yes 31815197
chr1 117048755 117048765 RELA JASPAR yes 31815198
Genes associated with rs192540361[chr1:117048758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More