EnhancerDB
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  3. rs192555500[chr1:42125855]
Enhancers that have rs192555500[chr1:42125855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192555500[chr1:42125855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42125850 42125860 CLOCK JASPAR yes 28406465
chr1 42125850 42125860 HEY1 JASPAR yes 28406466
chr1 42125852 42125857 MYC TRANSFAC yes 28406467
chr1 42125852 42125857 USF1 TRANSFAC yes 28406468
chr1 42125852 42125857 USF2 TRANSFAC yes 28406469
Genes associated with rs192555500[chr1:42125855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More