EnhancerDB
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  3. rs192556033[chr17:62675047]
Enhancers that have rs192556033[chr17:62675047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs192556033[chr17:62675047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 21778864
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 108282545
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 21778870
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 108282546
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 21778871
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 108282547
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 21778872
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 108282548
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 21778873
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 108282549
chr17 62673769 62675741 TCF7L2 GTRD no Colon (HCT116) 21778874
chr17 62673802 62676019 TCF7L2 GTRD no Colon (HCT116) 21778875
chr17 62673802 62676019 TCF7L2 GTRD no Colon (HCT116) 108282550
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 21778877
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 108282551
chr17 62674748 62675329 ZNF143 GTRD no Epithelial (MCF-7) 21778879
chr17 62674781 62675492 TCF7L2 GTRD no Colon (HCT116) 21778880
chr17 62674968 62675758 TCF7L2 GTRD no Colon (HCT116) 21778881
chr17 62674968 62675758 TCF7L2 GTRD no Colon (HCT116) 108282552
chr17 62674974 62675593 TCF7L2 GTRD no Colon (HCT116) 21778882
chr17 62675033 62675047 TLX1 JASPAR yes 55310256
chr17 62675034 62675051 ESR1 JASPAR yes 55310257
chr17 62675044 62675056 HINFP JASPAR yes 55310258
Genes associated with rs192556033[chr17:62675047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More