EnhancerDB
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  3. rs192853538[chr5:172882573]
Enhancers that have rs192853538[chr5:172882573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172875285 172888095 enh22823
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Heart
chr5 172882283 172882785 vista50214
VISTA
Transcript factors that have rs192853538[chr5:172882573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172881263 172882779 POLR2A UCSC Txn Factor no Conserved 108537566
chr5 172881263 172882779 POLR2A UCSC Txn Factor no Conserved 108537567
chr5 172882223 172882827 TCF7L2 UCSC Txn Factor no Conserved 108537568
chr5 172882253 172882682 JUND UCSC Txn Factor no Conserved 108537569
chr5 172882294 172882724 EP300 UCSC Txn Factor no Conserved 108537570
chr5 172882301 172882725 FOSL2 UCSC Txn Factor no Conserved 108537571
chr5 172882312 172882611 TEAD4 UCSC Txn Factor no Conserved 108537572
chr5 172882320 172882680 JUN UCSC Txn Factor no Conserved 108537573
chr5 172882320 172882718 TCF12 UCSC Txn Factor no Conserved 108537574
chr5 172882357 172882688 FOS UCSC Txn Factor no Conserved 108537575
chr5 172882372 172882682 NR3C1 UCSC Txn Factor no Conserved 108537576
chr5 172882562 172882573 FOSL2 JASPAR yes 67872832
chr5 172882562 172882573 JUNB JASPAR yes 67872833
chr5 172882562 172882573 FOSL2 JASPAR yes 70765782
chr5 172882562 172882573 JUNB JASPAR yes 70765783
chr5 172882562 172882576 JUN JASPAR yes 67872834
chr5 172882562 172882576 JUN JASPAR yes 70765784
chr5 172882563 172882574 BATF JASPAR yes 67872835
chr5 172882563 172882574 BATF JASPAR yes 70765785
Genes associated with rs192853538[chr5:172882573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More