EnhancerDB
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  3. rs192888598[chr1:42238584]
Enhancers that have rs192888598[chr1:42238584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192888598[chr1:42238584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42238577 42238591 ONECUT2 JASPAR yes 28420586
chr1 42238577 42238591 ONECUT3 JASPAR yes 28420587
chr1 42238577 42238592 FOXP1 JASPAR yes 28420588
chr1 42238578 42238593 FOXA1 JASPAR yes 28420589
chr1 42238579 42238590 FOXB1 JASPAR yes 28420590
chr1 42238579 42238590 FOXC1 JASPAR yes 28420591
chr1 42238579 42238591 FOXC2 JASPAR yes 28420592
chr1 42238580 42238592 FOXI1 JASPAR yes 28420593
chr1 42238581 42238595 ONECUT2 JASPAR yes 28420594
chr1 42238581 42238595 ONECUT3 JASPAR yes 28420595
chr1 42238581 42238596 FOXP1 JASPAR yes 28420596
chr1 42238581 42238596 HNF1A JASPAR yes 28420597
chr1 42238582 42238596 POU4F1 JASPAR yes 28420598
chr1 42238582 42238597 FOXA1 JASPAR yes 28420599
chr1 42238582 42238598 POU4F2 JASPAR yes 28420600
chr1 42238582 42238598 POU4F3 JASPAR yes 28420601
chr1 42238583 42238594 FOXB1 JASPAR yes 28420602
chr1 42238583 42238594 FOXC1 JASPAR yes 28420603
chr1 42238583 42238594 PROP1 JASPAR yes 28420604
chr1 42238583 42238595 FOXC2 JASPAR yes 28420605
chr1 42238584 42238596 FOXI1 JASPAR yes 28420606
Genes associated with rs192888598[chr1:42238584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More