EnhancerDB
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  3. rs193094375[chr1:42152890]
Enhancers that have rs193094375[chr1:42152890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs193094375[chr1:42152890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42151476 42153185 TCF7L2 GTRD no Colon (HCT116) 107802968
chr1 42152880 42152894 E2F7 JASPAR yes 28410290
chr1 42152880 42152894 E2F7 JASPAR yes 118279346
chr1 42152881 42152891 GCM2 JASPAR yes 28410291
chr1 42152886 42152890 LFA1 TRANSFAC yes 28410292
Genes associated with rs193094375[chr1:42152890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More