EnhancerDB
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  3. rs193140554[chr12:52555734]
Enhancers that have rs193140554[chr12:52555734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs193140554[chr12:52555734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52555714 52555734 RREB1 JASPAR yes 120923844
chr12 52555716 52555736 RREB1 JASPAR yes 120923845
chr12 52555718 52555738 RREB1 JASPAR yes 120923846
chr12 52555720 52555740 RREB1 JASPAR yes 120923847
chr12 52555731 52555744 SMAD2 JASPAR yes 120923848
Genes associated with rs193140554[chr12:52555734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More