EnhancerDB
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  3. rs193245627[chr16:70451100]
Enhancers that have rs193245627[chr16:70451100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70431585 70455744 enh4120
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 70451023 70451476 vista22871
VISTA
Transcript factors that have rs193245627[chr16:70451100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70450465 70451366 TCF7L2 GTRD no Colon (HCT116) 108204274
chr16 70450641 70451212 TCF7L2 GTRD no Colon (HCT116) 108204282
chr16 70450643 70451243 ZNF274 GTRD no Bone Marrow (K562) 21712705
chr16 70450643 70451243 ZNF274 GTRD no Bone Marrow (K562) 108204283
chr16 70450675 70451461 TCF7L2 GTRD no Colon (HCT116) 108204285
chr16 70450688 70451422 TCF7L2 GTRD no Colon (HCT116) 108204286
chr16 70450710 70451332 TCF7L2 GTRD no Colon (HCT116) 108204287
chr16 70450730 70451372 TCF7L2 GTRD no Colon (HCT116) 108204288
chr16 70451096 70451100 LFA1 TRANSFAC yes 11316761
chr16 70451096 70451100 LFA1 TRANSFAC yes 49388764
Genes associated with rs193245627[chr16:70451100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More