EnhancerDB
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  3. rs1966301[chr17:2719006]
Enhancers that have rs1966301[chr17:2719006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2712160 2721479 enh32057
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs1966301[chr17:2719006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2718222 2719026 ZBTB33 GTRD no Lung (A549) 108231258
chr17 2718413 2719007 ZNF274 GTRD no Liver (HepG2) 108231277
chr17 2718905 2719575 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231289
chr17 2718991 2719009 RARA JASPAR yes 52774557
chr17 2718998 2719011 NR2F1 JASPAR yes 52774558
chr17 2719002 2719010 CREB1 JASPAR yes 52774559
chr17 2719006 2719016 SREBF2 JASPAR yes 52774560
chr17 2719006 2719017 USF1 JASPAR yes 52774561
chr17 2719006 2719017 USF2 JASPAR yes 52774562
Genes associated with rs1966301[chr17:2719006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More