EnhancerDB
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  3. rs1966388[chr17:3858078]
Enhancers that have rs1966388[chr17:3858078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 3856865 3866455 enh4218
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Lung (A549) Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs1966388[chr17:3858078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 3858068 3858079 FOSL2 JASPAR yes 52809006
chr17 3858076 3858081 SP1 TRANSFAC yes 52809007
chr17 3858077 3858098 REST JASPAR yes 52809008
chr17 3858078 3858097 REST JASPAR yes 52809009
Genes associated with rs1966388[chr17:3858078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More