EnhancerDB
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  3. rs199558772[chr1:54870486]
Enhancers that have rs199558772[chr1:54870486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs199558772[chr1:54870486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54870471 54870492 ZNF263 JASPAR yes 28982520
chr1 54870476 54870496 RREB1 JASPAR yes 28982521
chr1 54870479 54870489 SP1 JASPAR yes 28982522
chr1 54870479 54870489 ZNF740 JASPAR yes 28982523
chr1 54870480 54870490 SP1 JASPAR yes 28982524
chr1 54870480 54870490 ZNF740 JASPAR yes 28982525
chr1 54870481 54870491 SP1 JASPAR yes 28982526
chr1 54870481 54870491 ZNF740 JASPAR yes 28982527
chr1 54870482 54870492 SP1 JASPAR yes 28982528
chr1 54870482 54870492 ZNF740 JASPAR yes 28982529
chr1 54870483 54870493 SP1 JASPAR yes 28982530
chr1 54870483 54870493 ZNF740 JASPAR yes 28982531
chr1 54870484 54870494 SP1 JASPAR yes 28982532
chr1 54870484 54870494 ZNF740 JASPAR yes 28982533
chr1 54870485 54870495 ZNF740 JASPAR yes 28982534
chr1 54870486 54870496 SP1 JASPAR yes 28982535
chr1 54870486 54870496 ZNF740 JASPAR yes 28982536
Genes associated with rs199558772[chr1:54870486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More