EnhancerDB
  1. Home
  2. SNP
  3. rs199573887[chr2:225882425]
Enhancers that have rs199573887[chr2:225882425]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225864797 225884855 enh34336
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Astrocyte Lung (A549) Blood (GM12878) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Spleen Blood (T-cell)
Transcript factors that have rs199573887[chr2:225882425]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225882417 225882432 MEF2C JASPAR yes 81367395
chr2 225882420 225882435 FOXP1 JASPAR yes 81367396
chr2 225882421 225882436 FOXP1 JASPAR yes 81367397
chr2 225882422 225882437 FOXP1 JASPAR yes 81367398
chr2 225882422 225882443 IRF1 JASPAR yes 81367399
chr2 225882423 225882438 FOXP1 JASPAR yes 81367400
Genes associated with rs199573887[chr2:225882425], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More