EnhancerDB
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  3. rs199590104[chr1:43426811]
Enhancers that have rs199590104[chr1:43426811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43426742 43427095 vista1388
VISTA
Transcript factors that have rs199590104[chr1:43426811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43426209 43426894 TCF7L2 GTRD no Colon (HCT116) 107803007
chr1 43426804 43426815 BATF JASPAR yes 28470860
chr1 43426804 43426815 BATF JASPAR yes 118281919
chr1 43426805 43426826 ZNF263 JASPAR yes 28470861
chr1 43426805 43426826 ZNF263 JASPAR yes 118281920
Genes associated with rs199590104[chr1:43426811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More