EnhancerDB
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  3. rs199843411[chr1:55258104]
Enhancers that have rs199843411[chr1:55258104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55256157 55264035 enh11874
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs199843411[chr1:55258104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55258101 55258105 NFE TRANSFAC yes 28998735
chr1 55258101 55258114 SMAD2 JASPAR yes 28998736
chr1 55258102 55258123 IRF1 JASPAR yes 28998737
chr1 55258104 55258119 PRDM1 JASPAR yes 28998738
chr1 55258104 55258125 IRF1 JASPAR yes 28998739
Genes associated with rs199843411[chr1:55258104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More