EnhancerDB
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  3. rs199991578[chr17:77790189]
Enhancers that have rs199991578[chr17:77790189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77780565 77806815 enh4626
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Stomach Muscle (A673) Placenta Blood (Karpas-422) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs199991578[chr17:77790189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77787958 77790353 EZH2 UCSC Txn Factor no Conserved 108305449
chr17 77788491 77790353 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108305457
chr17 77789849 77790895 ZNF143 GTRD no Epithelial (MCF-7) 21795993
chr17 77789947 77790730 ZNF143 GTRD no Epithelial (MCF-7) 21795994
chr17 77790043 77790347 ZNF274 GTRD no Bone Marrow (K562) 21795995
chr17 77790055 77790319 ZNF274 GTRD no Bone Marrow (K562) 21795996
chr17 77790088 77790701 ZNF143 GTRD no Epithelial (MCF-7) 21795997
chr17 77790095 77790357 ZNF143 GTRD no Epithelial (MCF-7) 21795998
chr17 77790168 77790584 ZNF143 GTRD no Epithelial (MCF-7) 21795999
chr17 77790182 77790191 SNAI2 JASPAR yes 56220906
chr17 77790182 77790192 TCF3 JASPAR yes 56220907
chr17 77790182 77790192 TCF4 JASPAR yes 56220908
chr17 77790184 77790193 ZEB1 JASPAR yes 56220909
chr17 77790186 77790191 SP1 TRANSFAC yes 56220910
chr17 77790187 77790197 ZNF740 JASPAR yes 56220911
Genes associated with rs199991578[chr17:77790189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More