EnhancerDB
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  3. rs200029940[chr1:183128433]
Enhancers that have rs200029940[chr1:183128433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183125041 183136908 enh12446
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs200029940[chr1:183128433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183128427 183128448 IRF1 JASPAR yes 33660170
chr1 183128428 183128449 IRF1 JASPAR yes 33660171
chr1 183128430 183128451 IRF1 JASPAR yes 33660172
chr1 183128431 183128452 IRF1 JASPAR yes 33660173
chr1 183128432 183128447 FOXP1 JASPAR yes 33660174
chr1 183128432 183128453 IRF1 JASPAR yes 33660175
chr1 183128433 183128448 FOXP1 JASPAR yes 33660176
Genes associated with rs200029940[chr1:183128433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More