EnhancerDB
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  3. rs200052256[chr12:122941183]
Enhancers that have rs200052256[chr12:122941183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs200052256[chr12:122941183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122940633 122941302 TCF7L2 GTRD no Colon (HCT116) 21579849
chr12 122940642 122941582 TCF7L2 GTRD no Colon (HCT116) 21579850
chr12 122940645 122941319 ZNF143 GTRD no Epithelial (MCF-7) 21579851
chr12 122940646 122941379 ZNF143 GTRD no Epithelial (MCF-7) 21579852
chr12 122940652 122942484 ZNF274 GTRD no Cervix (HeLa-S3) 21579853
chr12 122940669 122941505 TCF7L2 GTRD no Colon (HCT116) 21579854
chr12 122940676 122941496 TCF7L2 GTRD no Colon (HCT116) 21579855
chr12 122941103 122941875 ZNF274 GTRD no Cervix (HeLa-S3) 21579857
chr12 122941169 122941183 IRF7 JASPAR yes 124281325
chr12 122941171 122941183 IRF1 JASPAR yes 124281326
chr12 122941172 122941187 FOXP1 JASPAR yes 124281327
chr12 122941172 122941187 MEF2C JASPAR yes 124281328
chr12 122941172 122941193 IRF1 JASPAR yes 124281329
chr12 122941173 122941188 MEF2A JASPAR yes 124281330
chr12 122941174 122941186 FOXC2 JASPAR yes 124281331
chr12 122941174 122941186 MEF2A JASPAR yes 124281332
chr12 122941174 122941186 MEF2B JASPAR yes 124281333
chr12 122941174 122941186 MEF2D JASPAR yes 124281334
chr12 122941175 122941185 MEF2A JASPAR yes 124281335
chr12 122941176 122941191 FOXP1 JASPAR yes 124281336
chr12 122941177 122941198 IRF1 JASPAR yes 124281337
chr12 122941178 122941193 FOXP1 JASPAR yes 124281338
chr12 122941182 122941188 TBP TRANSFAC yes 124281339
Genes associated with rs200052256[chr12:122941183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More