EnhancerDB
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  3. rs200085000[chr10:28661261]
Enhancers that have rs200085000[chr10:28661261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs200085000[chr10:28661261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28660965 28661459 ZNF143 GTRD no Epithelial (MCF-7) 21422970
chr10 28660998 28661329 TCF7L2 GTRD no Colon (HCT116) 21422971
chr10 28660999 28661513 TCF7L2 GTRD no Colon (HCT116) 21422972
chr10 28661084 28661321 ZNF274 GTRD no Liver (HepG2) 21422973
Genes associated with rs200085000[chr10:28661261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More