EnhancerDB
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  3. rs200237764[chr6:40930552]
Enhancers that have rs200237764[chr6:40930552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40922705 40932367 enh38992
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1)
Transcript factors that have rs200237764[chr6:40930552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40930540 40930555 LEF1 JASPAR yes 101624391
chr6 40930541 40930555 TCF7L2 JASPAR yes 101624392
chr6 40930544 40930564 RREB1 JASPAR yes 101624395
chr6 40930545 40930557 FOXC2 JASPAR yes 101624396
chr6 40930547 40930562 FOXP1 JASPAR yes 101624397
Genes associated with rs200237764[chr6:40930552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More