-
Home
- SNP
- rs200260675[chr12:54412505]
Enhancers that have rs200260675[chr12:54412505]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
54405914 |
54417704 |
enh86112 |
|
|
| chr12 |
54411861 |
54412590 |
vista13554 |
|
|
| chr12 |
54412238 |
54415445 |
vista336 |
|
|
Transcript factors that have rs200260675[chr12:54412505]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
54411219
|
54412894
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107686658
|
|
|
chr12
|
54411219
|
54412894
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108036765
|
|
|
chr12
|
54411691
|
54413032
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108036826
|
|
|
chr12
|
54411981
|
54412577
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108036856
|
|
|
chr12
|
54412021
|
54412545
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21550228
|
|
|
chr12
|
54412021
|
54412545
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
108036857
|
|
|
chr12
|
54412232
|
54412672
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108036862
|
|
|
chr12
|
54412295
|
54412724
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21550229
|
|
|
chr12
|
54412295
|
54412724
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108036863
|
|
|
chr12
|
54412343
|
54412667
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108036864
|
|
|
chr12
|
54412366
|
54412836
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108036865
|
|
|
chr12
|
54412418
|
54412627
|
EGR1
|
UCSC Txn Factor
|
no
|
Conserved
|
108036866
|
|
|
chr12
|
54412418
|
54412627
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108036867
|
|
|
chr12
|
54412441
|
54412634
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108036868
|
|
|
chr12
|
54412449
|
54412819
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108036869
|
|
|
chr12
|
54412452
|
54412888
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108036870
|
|
|
chr12
|
54412457
|
54412861
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108036871
|
|
|
chr12
|
54412469
|
54412833
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108036872
|
|
|
chr12
|
54412493
|
54412873
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108036873
|
|
Genes associated with rs200260675[chr12:54412505], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |