EnhancerDB
  1. Home
  2. SNP
  3. rs200368996[chr1:17231845]
Enhancers that have rs200368996[chr1:17231845]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs200368996[chr1:17231845]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17231833 17231854 IRF1 JASPAR yes 27064173
chr1 17231837 17231852 PRDM1 JASPAR yes 27064174
chr1 17231841 17231859 NR3C1 JASPAR yes 27064175
chr1 17231842 17231860 NR3C1 JASPAR yes 27064176
Genes associated with rs200368996[chr1:17231845], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More