EnhancerDB
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  3. rs200390538[chr1:46436473]
Enhancers that have rs200390538[chr1:46436473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46429805 46450173 enh330
Liver (HepG2) Large Intestine Esophagus Stomach Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs200390538[chr1:46436473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46436464 46436485 IRF1 JASPAR yes 28633833
chr1 46436465 46436480 FOXP1 JASPAR yes 28633834
chr1 46436465 46436486 IRF1 JASPAR yes 28633835
chr1 46436467 46436482 FOXP1 JASPAR yes 28633836
chr1 46436467 46436488 IRF1 JASPAR yes 28633837
chr1 46436468 46436489 IRF1 JASPAR yes 28633838
chr1 46436469 46436484 FOXP1 JASPAR yes 28633839
chr1 46436470 46436485 FOXP1 JASPAR yes 28633840
chr1 46436470 46436491 IRF1 JASPAR yes 28633841
chr1 46436470 46436491 ZNF263 JASPAR yes 28633842
chr1 46436471 46436486 FOXP1 JASPAR yes 28633843
chr1 46436472 46436487 FOXP1 JASPAR yes 28633844
chr1 46436472 46436493 IRF1 JASPAR yes 28633845
chr1 46436473 46436488 FOXP1 JASPAR yes 28633846
chr1 46436473 46436494 ZNF263 JASPAR yes 28633847
Genes associated with rs200390538[chr1:46436473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More