EnhancerDB
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  3. rs200398023[chr1:43437255]
Enhancers that have rs200398023[chr1:43437255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs200398023[chr1:43437255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43437238 43437258 RREB1 JASPAR yes 28472412
chr1 43437245 43437255 ZNF740 JASPAR yes 28472414
chr1 43437246 43437266 RREB1 JASPAR yes 28472415
chr1 43437247 43437262 RUNX2 JASPAR yes 28472416
chr1 43437247 43437267 RREB1 JASPAR yes 28472417
chr1 43437248 43437268 RREB1 JASPAR yes 28472418
chr1 43437249 43437269 RREB1 JASPAR yes 28472419
chr1 43437251 43437271 RREB1 JASPAR yes 28472420
chr1 43437252 43437267 FOXP1 JASPAR yes 28472421
chr1 43437253 43437268 FOXP1 JASPAR yes 28472422
chr1 43437254 43437269 FOXP1 JASPAR yes 28472423
chr1 43437254 43437275 IRF1 JASPAR yes 28472424
chr1 43437255 43437270 FOXP1 JASPAR yes 28472425
chr1 43437255 43437276 IRF1 JASPAR yes 28472426
Genes associated with rs200398023[chr1:43437255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More