EnhancerDB
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  3. rs200422009[chr17:60243965]
Enhancers that have rs200422009[chr17:60243965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs200422009[chr17:60243965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60243956 60243966 HOXA13 JASPAR yes 55188482
chr17 60243956 60243966 HOXB13 JASPAR yes 55188483
chr17 60243956 60243966 HOXD13 JASPAR yes 55188484
chr17 60243956 60243967 HOXA10 JASPAR yes 55188485
chr17 60243957 60243966 CDX1 JASPAR yes 55188486
chr17 60243957 60243968 CDX2 JASPAR yes 55188487
chr17 60243962 60243974 FOXI1 JASPAR yes 55188488
chr17 60243962 60243977 FOXP1 JASPAR yes 55188489
chr17 60243963 60243975 FOXC2 JASPAR yes 55188490
chr17 60243963 60243977 ONECUT2 JASPAR yes 55188491
chr17 60243963 60243977 ONECUT3 JASPAR yes 55188492
chr17 60243964 60243975 FOXC1 JASPAR yes 55188493
chr17 60243965 60243969 YY1 TRANSFAC yes 55188494
Genes associated with rs200422009[chr17:60243965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More