EnhancerDB
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  3. rs200524716[chr19:4141544]
Enhancers that have rs200524716[chr19:4141544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4134682 4148106 enh52837
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Stomach
Transcript factors that have rs200524716[chr19:4141544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4141217 4141666 ZNF274 GTRD no Cervix (HeLa-S3) 21840526
chr19 4141538 4141553 FOXA1 JASPAR yes 112165248
chr19 4141539 4141551 FOXI1 JASPAR yes 112165249
chr19 4141539 4141554 FOXP1 JASPAR yes 112165250
chr19 4141540 4141551 FOXP2 JASPAR yes 112165251
chr19 4141540 4141552 FOXC2 JASPAR yes 112165252
chr19 4141540 4141554 FOXF2 JASPAR yes 112165253
chr19 4141541 4141549 FOXG1 JASPAR yes 112165254
chr19 4141541 4141549 FOXO3 JASPAR yes 112165255
chr19 4141541 4141552 FOXB1 JASPAR yes 112165256
chr19 4141541 4141552 FOXC1 JASPAR yes 112165257
chr19 4141541 4141557 POU4F3 JASPAR yes 112165258
chr19 4141542 4141553 FOXA1 JASPAR yes 112165259
chr19 4141542 4141557 FOXA1 JASPAR yes 112165260
chr19 4141543 4141555 FOXI1 JASPAR yes 112165261
chr19 4141543 4141557 POU4F1 JASPAR yes 112165262
chr19 4141543 4141558 FOXP1 JASPAR yes 112165263
chr19 4141543 4141558 HNF1A JASPAR yes 112165264
chr19 4141544 4141556 FOXC2 JASPAR yes 112165265
chr19 4141544 4141558 ONECUT2 JASPAR yes 112165266
chr19 4141544 4141558 ONECUT3 JASPAR yes 112165267
Genes associated with rs200524716[chr19:4141544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More