EnhancerDB
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  3. rs200550098[chr1:95048398]
Enhancers that have rs200550098[chr1:95048398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95042223 95053775 enh12074
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs200550098[chr1:95048398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95048392 95048413 IRF1 JASPAR yes 30889645
chr1 95048394 95048409 PRDM1 JASPAR yes 30889647
chr1 95048394 95048409 STAT2 JASPAR yes 30889648
chr1 95048394 95048415 IRF1 JASPAR yes 30889649
chr1 95048395 95048416 IRF1 JASPAR yes 30889650
chr1 95048396 95048417 IRF1 JASPAR yes 30889651
chr1 95048397 95048412 FOXP1 JASPAR yes 30889652
chr1 95048397 95048418 IRF1 JASPAR yes 30889653
chr1 95048398 95048413 FOXP1 JASPAR yes 30889654
chr1 95048398 95048419 IRF1 JASPAR yes 30889655
Genes associated with rs200550098[chr1:95048398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More