EnhancerDB
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  3. rs200558818[chr5:96296880]
Enhancers that have rs200558818[chr5:96296880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 96286174 96313595 enh8576
Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
Transcript factors that have rs200558818[chr5:96296880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 96296877 96296891 IRF7 JASPAR yes 64481528
chr5 96296878 96296893 STAT2 JASPAR yes 64481529
chr5 96296879 96296891 IRF1 JASPAR yes 64481530
chr5 96296879 96296894 FOXP1 JASPAR yes 64481531
chr5 96296879 96296900 IRF1 JASPAR yes 64481532
chr5 96296880 96296901 IRF1 JASPAR yes 64481533
Genes associated with rs200558818[chr5:96296880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More