EnhancerDB
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  3. rs200620283[chr15:42254216]
Enhancers that have rs200620283[chr15:42254216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42246345 42263215 enh3550
Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Heart
Transcript factors that have rs200620283[chr15:42254216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42254206 42254227 IRF1 JASPAR yes 23010642
chr15 42254212 42254233 IRF1 JASPAR yes 23010643
Genes associated with rs200620283[chr15:42254216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More