EnhancerDB
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  3. rs200677639[chr6:43786526]
Enhancers that have rs200677639[chr6:43786526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200677639[chr6:43786526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43786506 43786527 IRF1 JASPAR yes 101788841
chr6 43786508 43786529 IRF1 JASPAR yes 101788845
chr6 43786510 43786531 IRF1 JASPAR yes 101788848
chr6 43786511 43786526 FOXP1 JASPAR yes 101788849
chr6 43786511 43786532 IRF1 JASPAR yes 101788850
chr6 43786512 43786527 FOXP1 JASPAR yes 101788851
chr6 43786515 43786530 STAT2 JASPAR yes 101788852
chr6 43786517 43786538 IRF1 JASPAR yes 101788853
chr6 43786523 43786544 IRF1 JASPAR yes 101788854
Genes associated with rs200677639[chr6:43786526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More