EnhancerDB
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  3. rs200719193[chr1:25346344]
Enhancers that have rs200719193[chr1:25346344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs200719193[chr1:25346344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25346335 25346355 TP63 JASPAR yes 27554298
chr1 25346337 25346352 TP53 JASPAR yes 27554299
chr1 25346339 25346348 HIC2 JASPAR yes 27554300
chr1 25346339 25346354 RUNX2 JASPAR yes 27554301
chr1 25346342 25346362 RREB1 JASPAR yes 27554302
Genes associated with rs200719193[chr1:25346344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More