EnhancerDB
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  3. rs200828604[chr1:203873281]
Enhancers that have rs200828604[chr1:203873281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203872551 203879315 enh12568
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs200828604[chr1:203873281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203872375 203873575 ZNF143 GTRD no Epithelial (MCF-7) 21369916
chr1 203872988 203873521 ZNF143 GTRD no Epithelial (MCF-7) 21369917
chr1 203873009 203873547 ZNF143 GTRD no Epithelial (MCF-7) 21369918
chr1 203873010 203873493 ZNF143 GTRD no Epithelial (MCF-7) 21369919
chr1 203873266 203873281 FOXP1 JASPAR yes 34664239
chr1 203873267 203873282 FOXP1 JASPAR yes 34664240
chr1 203873268 203873283 FOXP1 JASPAR yes 34664242
chr1 203873268 203873289 IRF1 JASPAR yes 34664243
chr1 203873269 203873284 FOXP1 JASPAR yes 34664244
chr1 203873269 203873290 IRF1 JASPAR yes 34664245
chr1 203873270 203873285 FOXP1 JASPAR yes 34664246
chr1 203873272 203873287 FOXP1 JASPAR yes 34664247
chr1 203873273 203873294 IRF1 JASPAR yes 34664248
chr1 203873274 203873289 FOXP1 JASPAR yes 34664249
chr1 203873277 203873291 SPIC JASPAR yes 34664250
chr1 203873277 203873291 STAT1 JASPAR yes 34664251
chr1 203873277 203873292 PRDM1 JASPAR yes 34664252
chr1 203873277 203873292 STAT2 JASPAR yes 34664253
chr1 203873279 203873300 IRF1 JASPAR yes 34664254
Genes associated with rs200828604[chr1:203873281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More