EnhancerDB
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  3. rs200882980[chr1:172612882]
Enhancers that have rs200882980[chr1:172612882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs200882980[chr1:172612882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172612692 172613002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350146
chr1 172612694 172612958 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350147
chr1 172612856 172613136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350148
chr1 172612867 172612886 REST JASPAR yes 33142958
chr1 172612880 172612891 NFE2L2 JASPAR yes 33142959
Genes associated with rs200882980[chr1:172612882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More