EnhancerDB
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  3. rs200897966[chr12:122944985]
Enhancers that have rs200897966[chr12:122944985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs200897966[chr12:122944985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122943600 122946552 TCF7L2 GTRD no Colon (HCT116) 21579912
chr12 122943879 122945470 ZNF274 GTRD no Cervix (HeLa-S3) 21579914
chr12 122944057 122945430 TCF7L2 GTRD no Colon (HCT116) 21579916
chr12 122944078 122944985 TCF7L2 GTRD no Colon (HCT116) 21579917
chr12 122944130 122945150 TCF7L2 GTRD no Colon (HCT116) 21579918
chr12 122944221 122945793 TCF7L2 GTRD no Colon (HCT116) 21579919
chr12 122944240 122945386 ZNF274 GTRD no Cervix (HeLa-S3) 21579920
chr12 122944244 122945365 ZNF274 GTRD no Cervix (HeLa-S3) 21579921
chr12 122944276 122945068 ZNF143 GTRD no Epithelial (MCF-7) 21579923
chr12 122944296 122945699 TCF7L2 GTRD no Colon (HCT116) 21579924
chr12 122944298 122945568 AR GTRD no Prostate (PC-3) 21579925
chr12 122944301 122945730 ZNF143 GTRD no Epithelial (MCF-7) 21579926
chr12 122944303 122945630 ZNF143 GTRD no Epithelial (MCF-7) 21579927
chr12 122944335 122945353 TCF7L2 GTRD no Colon (HCT116) 21579928
chr12 122944363 122945090 TCF7L2 GTRD no Colon (HCT116) 21579929
chr12 122944412 122945272 ZNF274 GTRD no Cervix (HeLa-S3) 21579930
chr12 122944533 122945132 ZNF274 GTRD no Cervix (HeLa-S3) 21579931
chr12 122944559 122945122 ZNF143 GTRD no Epithelial (MCF-7) 21579932
chr12 122944589 122945053 ZNF274 GTRD no Cervix (HeLa-S3) 21579933
chr12 122944666 122945369 ZNF274 GTRD no Cervix (HeLa-S3) 21579934
Genes associated with rs200897966[chr12:122944985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 123104824 123215390 - HCAR1 ENSG00000196917.4 123215390 159839 Lung 0.216545 12649