EnhancerDB
  1. Home
  2. SNP
  3. rs200916980[chr1:232733081]
Enhancers that have rs200916980[chr1:232733081]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs200916980[chr1:232733081]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232733071 232733082 USF1 JASPAR yes 36175519
chr1 232733071 232733082 USF2 JASPAR yes 36175520
chr1 232733072 232733090 ESR1 JASPAR yes 36175521
chr1 232733076 232733084 MEIS2 JASPAR yes 36175522
chr1 232733076 232733084 MEIS3 JASPAR yes 36175523
chr1 232733077 232733089 PKNOX2 JASPAR yes 36175524
Genes associated with rs200916980[chr1:232733081], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More