EnhancerDB
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  3. rs200922962[chr18:55505163]
Enhancers that have rs200922962[chr18:55505163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs200922962[chr18:55505163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55504978 55505574 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823598
chr18 55505056 55505336 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823599
chr18 55505063 55505447 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823600
chr18 55505083 55505432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823601
chr18 55505094 55505404 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823602
chr18 55505099 55505395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823603
chr18 55505115 55505364 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823604
chr18 55505122 55505350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823605
chr18 55505131 55505381 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823606
chr18 55505142 55505362 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823607
chr18 55505145 55505292 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823608
chr18 55505153 55505317 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823609
chr18 55505157 55505172 FOXP1 JASPAR yes 110891140
chr18 55505158 55505173 FOXP1 JASPAR yes 110891141
chr18 55505159 55505174 FOXP1 JASPAR yes 110891142
chr18 55505159 55505180 IRF1 JASPAR yes 110891143
Genes associated with rs200922962[chr18:55505163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More